Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EEKAACVVT--DLKACLPDIIGETPPSTKCCTKLKD-----------KKSCFCEYLKNPLIAPY--MTS--AKQVLEACGVPVPVCQRF
2ALG Chain:A ((1-79))
--MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24416 for 364 contacts (-67.1/contact) +
2D Compatibility (PS) -6151 + (NN) -3266 + (LL) 1208
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -37875.0 ( -104.05 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: