Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APIKVAGGVGNCEKDMQWCIDKT-------EFF---THGYIYERCCYNMI-------------MKKKCMCLFLKSPKLKIAARNVNNACGRGGLPKDAFSEFKC------------
1DLW Chain:A ((1-116))
SLFEQLGGQAAVQAVTAQFYANIQADATVATFFNGIDMPNQTNKTAAFLCAALGGPNAWTGRNLKEVHANMGVSNAQFTTVIGHLRSALTGAGVAAALVEQTVAVAETVRGDVVTV
General information:
TITO was launched using:
RESULT:
Template:
1DLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24042 for 493 contacts (-48.8/contact) +
2D Compatibility (PS) -8057 + (NN) 1869 + (LL) 0
1D Compatibility (HY) 400 + (ID) 350
Total energy: -30180.0 ( -61.22 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_1DLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DLW-query.scw
PDB file :
Tito_Scwrl_1DLW.pdb
: