Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPICNIETNDLVKCHPAFTGXNNPPPPGPDCCALVRAANLQCLCP-YKPYLSR-F---G--------IDPSKVRPLLTRCGVNTPPSCF
2LVF Chain:A ((46-105))
---------------------------MSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSRCNLS-PMRC-
General information:
TITO was launched using:
RESULT:
Template:
2LVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22878 for 231 contacts (-99.0/contact) +
2D Compatibility (PS) -4913 + (NN) -928 + (LL) 920
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -30199.0 ( -130.73 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_2LVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LVF-query.scw
PDB file :
Tito_Scwrl_2LVF.pdb
: