Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLA--------SEKKAKPLDAKNSNVESSKTRGTETQ-KARDVKKNFKKDVKIVGQNAEKKGEASPVILVGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKGANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLSSRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNYMGARFGVSYSPRYDSNLFVIKDGDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAAVGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKFAASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHENFYISLTYFGSKMSDGDKLHDVAFGIQYDLSPASSKGKFVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 3OQQ Chain:A ((227-369)) | ----------------------------------------------------------------------------EELSTKNIVKV--ENKNWNWSNDTRKEPRFAILTVDKAQAEGTVITLDGLTSLMDNNQDMFQVTQGKVREGLPMLRAEVRLIGKEGLTGAERDAQLAAFRELILDTNRQNFFIKVNGGKEIHMRGYAPTSAYKAEYE--ALVAGDTTLDANVYYSNTKGSTWGVKLPVGTRHAYERVPFREAYPDFTKWVDSKGVSNQKWYENFVDEKTIRYW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52378 for 655 contacts (80.0/contact) +
2D Compatibility (PS) -13401 + (NN) 5136 + (LL) 24168
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: 61081.0 ( 93.25 by residue)
QMean score : 0.050
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