Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MDRLKKIHWLLVTNVIALFCIGIVVQYSSAGGKWAPFAIHQLVIFSFFFLL----------AIAMSFIELDFYLKHAYFFYIAAVISLLVVNFFGLYTMGATRWIRIGPISLQPSEFAKVGLILALARYFNKQSVYK-----MMEFQRLLKALIFIFLPVFLVLKQPNLGTAVIMLFIGASII-----------------------FTAIIKRAHLIIYGIISILVIPAIWPSLRSYHKQRILSFLDSSVDPLGIGYNAQQSQIAIGSGGLFGKSFVSGSQTQLG------FLPEKHTDFAFAVLSEEWGFLGSMTLIVLYTTLLAIIFSIAYRSKNYFSKLVSIGIFAFFGVHFFINIGMTIGLLPVIGDPLPFLSYG---GSTTAASSICIGLLLSSV------ASMKDLKLKLSISSIERPVV----------------------------------------------- |
| 5DA0 Chain:A ((14-484)) | QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVP------RSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGF-FGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTVFTH-DLSLGVLIGVVLSALFFARKVSQLSQVTPVDEVDGTRTYRVRGQLFFVSTHDFLHQFDFTHPARRVVIDLSDAHFWDGSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -328623 for 2916 contacts (-112.7/contact) +
2D Compatibility (PS) -37330 + (NN) -3301 + (LL) 336
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -384268.0 ( -131.78 by residue)
QMean score : 0.254
|
|
|