Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLPILQVIIPIIASMLCFFTRK---HKVSWFISFTTTIVTLFISSVLLIKTY--NGETITYHLGNWAPPYGIELRIDVL-NSLILTLVNFVALISVLYSFYINEKEISKNKITGLYSLFLLCLSGLLGILVTNDIFNLYVFLEISSLSSYVLVSM-GKDKKALVAAFEYLISGTIGATFYLLGIGLLYSTTGTLNMSDMAERIVPLYNNN--IVKLGTLFIFVGLSNKMALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSIIKTSLFMVAGCISYKFGTTK-IENLSGLKKSMPYIAFAFTLLSLALVGVPL-TNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYS---------NPIRLVVEKLVF------------------------------------------------------------------------------------------------------------------ |
| 3RKO Chain:B ((1-612)) | MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIART------HGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -621404 for 4549 contacts (-136.6/contact) +
2D Compatibility (PS) -48618 + (NN) -11592 + (LL) 884
1D Compatibility (HY) -47200 + (ID) 5200
Total energy: -733130.0 ( -161.16 by residue)
QMean score : 0.353
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