Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLPSTNILDTQLTDVTTAPVVKLNILIITS-NSTVVPVDVE-LGNLLCLQVMQARNISDGIMWGYTGAVILHVI
2AD6 Chain:A ((56-95))
-------------------GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG
General information:
TITO was launched using:
RESULT:
Template:
2AD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26815 for 184 contacts (-145.7/contact) +
2D Compatibility (PS) -4299 + (NN) 1147 + (LL) 1452
1D Compatibility (HY) -1600 + (ID) 100
Total energy: -30215.0 ( -164.21 by residue)
QMean score : 0.073
(partial model without unconserved sides chains):
PDB file :
Tito_2AD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AD6-query.scw
PDB file :
Tito_Scwrl_2AD6.pdb
: