Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFGT--QSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKE-HNIGLNILKRQIECQLLWDKIIEVRIVPFINISDKEVNNAKGQIEK--P-DYLITFQEFIIPNQK-----DADVYGIAEDLVEKLR-NNNN---DFIPEAPIK-MR-K----VTVNLNQL---KGNLKSILEGLKTGDIAGPVSSS-EDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSESLLDNLKEQKVNCLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
| 3NRK Chain:A ((50-323)) | -------------------LNRVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQLKI-AVPPPNEQEIRSWYNQNKDKVGFEI--RYRIISIAPENDSIQEENRLYKEVSEIRKSILADPSSFALIAGSPRNDPALRARRGMVEWISSFDLYKYSKITATIAAPLPNGGVSEVFRDERKRYCILKIEGKRP--TPMENLRGGIQNILYRDKEEDTFHRWLKESRAEIPIQIFDEAYRKENKIPLKEETFHL------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60437 for 1564 contacts (-38.6/contact) +
2D Compatibility (PS) -26311 + (NN) -7566 + (LL) 8504
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -96710.0 ( -61.84 by residue)
QMean score : 0.457
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