Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
1JID Chain:A ((83-98))
---------RVQLKQEDGSLCLVQFPSRKSVMLYAAEMIPKLKTR-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1676 for 54 contacts (-31.0/contact) +
2D Compatibility (PS) -1611 + (NN) -190 + (LL) 2220
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -2707.0 ( -50.13 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1JID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JID-query.scw
PDB file :
Tito_Scwrl_1JID.pdb
: