Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEP--RVHLSMDDSGKKINLDIAPENCSATKDGFLCIDKNEQDYKLKILIKKS
3R7D Chain:C ((19-65))
-------------------------------------LQTAQELKSGKTDNQLTGKFAANL--FFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVC
General information:
TITO was launched using:
RESULT:
Template:
3R7D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5193 for 197 contacts (26.4/contact) +
2D Compatibility (PS) -4348 + (NN) 886 + (LL) 1412
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -857.0 ( -4.35 by residue)
QMean score : -0.041
(partial model without unconserved sides chains):
PDB file :
Tito_3R7D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R7D-query.scw
PDB file :
Tito_Scwrl_3R7D.pdb
: