Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MKQYTFRIDNKDPLYKK-LIKLPTA-YYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWEN----DKIVLHKGSSALY------------ |
| 1AG2 Chain:A ((124-226)) | GLGGYMLGSAMSRPMIHFGNDWEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCVTQYQKESQAYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15336 for 439 contacts (34.9/contact) +
2D Compatibility (PS) -7223 + (NN) 1155 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 750
Total energy: 5718.0 ( 13.03 by residue)
QMean score : 0.152
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