Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEEKDSN-FAMEK--PGNNYVGCISSENGECKNFYDLKLNFVKY-NSGNNSSLYPYYYNLENFGNFLEVDVKLRELIGLKKGLKD----------------------------------- |
3KYE Chain:A ((10-128)) | VSDLDWLMSGLVQRVPHTTSAVLLSC-DGLVKSVHGLDPDSADHMAALASGLYSLGRSAGIRFGDGGDVRQVVVELDSTLLFVSTAGSGTCLAVLAGREADAAVLGYEMAMLVKSVRPYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12247 for 448 contacts (27.3/contact) +
2D Compatibility (PS) -8198 + (NN) 658 + (LL) 104
1D Compatibility (HY) 6000 + (ID) 350
Total energy: 10461.0 ( 23.35 by residue)
QMean score : 0.049
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