Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIKNKVFNRRAFILGGIQLTISTIFSCRLYSLQIRNRQKYEKLADNNRIRVAAIMPKRGRILDRNGIELA--------------VDKISYIVLFDKQKISSE------EVDW------------ETLSEIESNVTKSSETKITALYKRHYPFGSICSHTLGYT----------KKQQGINEA---GISGIEYTYDHILKGKPG-RSEQEINSKKRIVRELSSIPQQDGQDVQLTIDIDLQEKIAEIFKGHKGSVTAIDVGNGEILTLYNSPSYDNNLFANKLSNEAWEGLNTPSL-PLVNRALSYQI--PPGSIFKIIVALAGLKDGIITPEEKFSCVGYMKIGERRF----CCLKSKVHGYVSLNEAMALSCNTYFYNIGKKISVDSLVEMARKFGIGSGPLIGAFKEEAPGLLP--DKDWRTRKLYSEWYLGDTVNLVIGQGYVLTTPLQ-LAVLAARIATGKEVIPRIEMSKTMQDFPDIDIAHEHLSIVRKAMFNMVNI--KAGTYRKGLSSIRIAGKTGTPEINSK-GESHK---LFIAYGPYHDPRYAISVFIEYGKAPRQDVAMANEILRYMLKG |
| 4CJN Chain:A ((116-616)) | -------------------------------------------------IHIENLKSERGKILDRNNVELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIKQQMDQNWVQDDTFVPLKTVKKMDEYLSDFAKKFHLTTNETESRNYPLGKATSHLLGYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTLIEKKKKDGKDIQLTIDAKVQKSIYNNMKNDYGSGTAIHPQTGELLALVSTPSYDVYPFMYGMSNEEYNKLTEDKKEPLLNK---FQITTSPGSTQKILTAMIGLNNKTLDDKTSYKIDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKLGVG---------EDIPSDYPFYNAQISNKNLDNEILLADS---GYGQGEILINPVQILSIYSALENNGNINAPHLLKDTKNKVWKKNIISKENINLLTDGMQQVVNKTHKEDIYR---SYANLIGKSGTAELKMKQGETGRQIGWFISYDK-DNPNMMMAINVK----DVQDKGMASYNAKISGKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161585 for 3389 contacts (-47.7/contact) +
2D Compatibility (PS) -45009 + (NN) -5813 + (LL) 5180
1D Compatibility (HY) -17600 + (ID) 6800
Total energy: -231627.0 ( -68.35 by residue)
QMean score : 0.403
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