Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATIIGIILGGRLGFVLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLFLGRIGNFVNGELFGRVTTMPWGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGIIVYLSALNSKFNTKSVA |
| 3B5D Chain:A ((83-105)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLPAIIGMMLICAGVLIINLLS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35300 for 210 contacts (-168.1/contact) +
2D Compatibility (PS) -1834 + (NN) 3704 + (LL) 17024
1D Compatibility (HY) -4000 + (ID) 250
Total energy: -20656.0 ( -98.36 by residue)
QMean score : ?
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