Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
2BG9 Chain:E ((214-242))
---IQRKPLFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIFLFLIAQKVPETSLN
General information:
TITO was launched using:
RESULT:
Template:
2BG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11370 for 114 contacts (-99.7/contact) +
2D Compatibility (PS) -2934 + (NN) 62 + (LL) 188
1D Compatibility (HY) -4800 + (ID) 300
Total energy: -19154.0 ( -168.02 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_2BG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BG9-query.scw
PDB file :
Tito_Scwrl_2BG9.pdb
: