Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEK-SKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
1JB0 Chain:M ((1-31))
MALTDTQVYVALVIALLPAVLAFRLSTELYK---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4338 for 106 contacts (40.9/contact) +
2D Compatibility (PS) -3169 + (NN) -513 + (LL) 4216
1D Compatibility (HY) -2400 + (ID) 350
Total energy: 2122.0 ( 20.02 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1JB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB0-query.scw
PDB file :
Tito_Scwrl_1JB0.pdb
: