Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIILAAGHGKRMNSGLPKVLHKIGNFSMLQHIIYNARQLNPENISVVANL--PLIERLKCLEDIQLITQESTLGTGDAVKTAVRNMKELSDSNIIVVQYGDTPLIKNSTITQMVSCLEGKALVCLGFKTSNKE-YGRLIIENGSLREIVETQDDENSDEEF-LANAGIMVAYAKNLRELVEKIECNGSTYEYYLTDIVSIAVKSNLNVGYV-TTDEEEATGINSRNDLAKAEFYFQENRRKFFTDSGVTLVAPET------VFFSLDTQIGMDSIIYPYVFFGPGVRIGPG-----------AKIGPFTKCEDT------TIG------------DGAIVGNFVEAKASDIGTNTKIKHLSYIGNTEVGRESNIGAGTVVCNYDGKKKHRTNIGSNCFVGANSSLIAPLNVHDESVIAAGSIIVKDVPKKRLVITRRKQMVKKIK |
4FCE Chain:A ((12-447)) | --VILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKT-----LNWVLQAEQLGTGHAMQQAA---PHFADDEDILMLYGDVPLISVDTLQRLLAAKPEGGIGLLTVKLDNPSGYGRIVRENGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAENELVISRVKQVHIQGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252573 for 3019 contacts (-83.7/contact) +
2D Compatibility (PS) -42245 + (NN) -10558 + (LL) 892
1D Compatibility (HY) -30400 + (ID) 7450
Total energy: -342334.0 ( -113.39 by residue)
QMean score : 0.455
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