Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------MGAYNTAPKDLRLIVFLGHLTINNFIILYSIVSIIRNFMSIDKKLKILPNK-VLIIVTLVPKDTEKM-LQDDKNSKFIMLIY---------------------------------------------------------- |
4H08 Chain:A ((1-200)) | GREYIEWSDIWIPGANKTDLPHVLLIGNSITRGYYGKVEAALKEKAYVGRLSNSKSVGDPALIEELAVVLKNTKFDVIHFNNGLHG--FDYTEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVNDLWKVVIDHPEYYAGGDGTHPIDAGYSALANQVIKVIKNVLVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25601 for 424 contacts (-60.4/contact) +
2D Compatibility (PS) -8340 + (NN) 223 + (LL) 336
1D Compatibility (HY) 800 + (ID) 500
Total energy: -33082.0 ( -78.02 by residue)
QMean score : 0.136
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