Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEVSNSFDEIKVFIEQKKEILKYIVSWLKEDKQENFLKEFEQIQID-FSEKAKRLTSLAMKKLKILTIADLNLAVISQNQYMKISYKSVISRNSVHIMLIKKNSDNSFAFYDPNLWCSF
4BPW Chain:B ((120-161))
-------------FIQQEMDLLRFRFSI-PKDKIQDFLKD-SQLQFEAISDEEKTLREQEIVASSPSLSGLKLGFESIYKIPFADALDLFRGRKVYLEDGFAYVPLKDIVAIILNEFRAK
General information:
TITO was launched using:
RESULT:
Template:
4BPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2923 for 140 contacts (20.9/contact) +
2D Compatibility (PS) -4257 + (NN) -1752 + (LL) 1416
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -7220.0 ( -51.57 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4BPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BPW-query.scw
PDB file :
Tito_Scwrl_4BPW.pdb
: