Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKT-ST----------------NTVFSDGNQSAKIMLVGEAPGAN-EDLKGIPFCGA-SGMLLDKMLSAINLDRT------------KVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALI-SPHILILVGGISCYSLLDNTKTIST-----LRGRFHTYTNQYLSYSITTAVIFHPAYLLRQPAQKRLAWEDLKKIREYLNSTNNCTGV |
2D3Y Chain:A ((2-217)) | -------------------------------------------------------------------------DREAFVQTLTACRLCPRLVAWREEVVGRKRAFRGEPYWARPVPGFGDPEARILLFGLAPGAHGSNRTGRPFTGDASGAFLYPLLHEAGLSSKPESLPGDDLRLYGVYLTAAVRCAPPKN-KPTPEELRACARWTEVELGLLPEVRVYVALGRIALEALLAHF-GLRKSAHPFRHGAHYPLP-----GGRHLLASYHVSRQNTQ--TGRLTREMFLEVLMEAKRLAGL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74456 for 1460 contacts (-51.0/contact) +
2D Compatibility (PS) -19831 + (NN) -14924 + (LL) 6092
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -110919.0 ( -75.97 by residue)
QMean score : 0.517
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