Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSIYVTLSISLVLILLQVTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLITPKLTVHNVYMQCNNNKEQKLSTLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSNRENFINIINAKTSSNAVDIVIKGSQVSLNNNFTDYDNIVNIEKVAIGKSKQFSGEIRVDSNDYDFSGKVNITKKNVHISVESNFINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKITNLSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQNDRKSNHTNINISFSKVNLDSIRNSSRRIIDIKDLLECFRKVVPRNLSLDFNIEASNIQYQNKILDKSHAILKFADGEIKVDMLLKFPGTNNVSHLSGKVSNSGTLSEFNGNLLVKGDNFKSFISCFFPSIKIKGNQKNQFTLSSELHFAPRILSISNIRFLNDKEFLQGSIKVSHTKKHNVVGGRFSVHNLDADKYDYSLFSSLSKMGWLKNLRYDVSIKINANDFKLNDTKIKDLDFLLKMEKGKLVVDKINLSGEDCDINGSTKILVDQRYTKPLLEVNLTGNKFNGDIFKLPSFIEVKRDSRNKINQIQWSTKQFDFLDNKESFDANVQINAIEFRVGQNVLKDFNLDAVVRNNTVTMRQVSYALEHGQVFFQGYLRSDSMYTKFLITNLDAKGIGKAIGIDNVDGRISLNGEIKAQGKSFHGWANNLSGEINLQAQEIEFTNVDFNSFITNLLNGKNKSEISTLAHDDIYNGSTLFENVIGKANIKNGVCSTSLQFRIDQASGSISSNLTLPNFALISLVRFFFILPGHSSPIYIDMHLDGPIWHPKMNFDVDQIFSTLKRIRSIKFIFAK |
2YEW Chain:A ((125-141)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVMKPAHVKGTIDNPEL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3733 for 57 contacts (-65.5/contact) +
2D Compatibility (PS) -1740 + (NN) -1890 + (LL) 51064
1D Compatibility (HY) -800 + (ID) 200
Total energy: 42701.0 ( 749.14 by residue)
QMean score : -0.203
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