Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAERANDIRPGQVLEHNGGLFLVVSIMHTQPGKGGAYIQAEMKNIKTGAKLYERFRSDATIRRAILDEEEYIYLFTEGNIVNLMHPSNYEQITINLDLLEEKKIYLQDNMRIKVVTYQDKIIFAHVPDYVRLTVKETESFIKGQTITSSYKPAVLENGMRINVPQFIKEEDKIVVYTPDDSYYERVKE
1UEB Chain:A ((1-184))
-MISVTDLRPGTKVKMDGGLWECVEYQHQKLGRGGAKVVAKFKNLETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVG-AEFFKEGMTALGDMYEGQPIKVTPPTVVELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVDTRTGEYVGRA--
General information:
TITO was launched using:
RESULT:
Template:
1UEB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91104 for 1284 contacts (-71.0/contact) +
2D Compatibility (PS) -19856 + (NN) -5319 + (LL) 440
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -127739.0 ( -99.49 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1UEB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UEB-query.scw
PDB file :
Tito_Scwrl_1UEB.pdb
: