Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MNSVIEITSIK------RRFCAYLIDM-------AVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNIHTISL-DGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK
4B9G Chain:A ((16-161))
DIDSAVRIIPVNYDSDPKLNSQLYTVEMTIPAGVSAVKIVPTDSLTSSGQQIGKLVNVNNPDQNMNYYIRKDSGAGKFMAGQK----GSFSVKENTSYTFSAIYTGG--------------------EYPNSGYSSG---------TYAGHLTVSFYSNDNKQRTEIATKNFPVSTTIS
General information:
TITO was launched using:
RESULT:
Template:
4B9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128814 for 938 contacts (-137.3/contact) +
2D Compatibility (PS) -14140 + (NN) 3633 + (LL) 4384
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -135987.0 ( -144.98 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_4B9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B9G-query.scw
PDB file :
Tito_Scwrl_4B9G.pdb
: