Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPISIKETNADQLPNEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
3JSB Chain:A ((99-143))
-----LLECFVRSTPASFEKKFIEDTNK-LACIREDLAVAGVT--------LVPIVDGRCDYDNSFMPEWANFKFRDLLFKLLEYSN----------------
General information:
TITO was launched using:
RESULT:
Template:
3JSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5120 for 245 contacts (20.9/contact) +
2D Compatibility (PS) -4199 + (NN) 4692 + (LL) 3528
1D Compatibility (HY) -800 + (ID) 400
Total energy: 7941.0 ( 32.41 by residue)
QMean score : -0.005
(partial model without unconserved sides chains):
PDB file :
Tito_3JSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JSB-query.scw
PDB file :
Tito_Scwrl_3JSB.pdb
: