Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSGNVLLTFCSNSGYLRSDMNAVKNLVIWLLIIVITAMFIDSQKDRLRNRFLSTFLPYRGRIQDSRSVEFTKSYDGHFYIQAQVNGHNITFLLDTGATDIVLSQKDALYAGIKLQDIQDFKIYETAKGQIRAGVVQIPQIKIGNFLINDVQASVNTHSMPHSLLGMSFLKYFHFTIRGNKLILYCNSTY
1HSI Chain:A ((11-97))
--------------------------------------------------------------------------------VTAYIEGQPVEVLLDTGA-------DDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLN---KKVRATIMTGDTPINIFGRNILTALGMSLNL-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66291 for 631 contacts (-105.1/contact) +
2D Compatibility (PS) -9100 + (NN) 496 + (LL) 7392
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -75953.0 ( -120.37 by residue)
QMean score : 0.366
(partial model without unconserved sides chains):
PDB file :
Tito_1HSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSI-query.scw
PDB file :
Tito_Scwrl_1HSI.pdb
: