Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC
4O7T Chain:A ((12-232))
-----------AKKMIPIDDDKLIME-FKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEHGIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLPLPEGYELPEPIVELYYKNDELHDPMINYYHAKVLG-ISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFKLEFGK--DKNGDIVLADEISPDTCRFWDAKTKRSLDKDVFRFDKGDLIEAYKEIYERITGEKP
General information:
TITO was launched using:
RESULT:
Template:
4O7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80957 for 1702 contacts (-47.6/contact) +
2D Compatibility (PS) -23855 + (NN) -3642 + (LL) 1040
1D Compatibility (HY) -22800 + (ID) 5150
Total energy: -135364.0 ( -79.53 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_4O7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O7T-query.scw
PDB file :
Tito_Scwrl_4O7T.pdb
: