Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDI----------------LLQSSFLFVRGNHENCDRAY-EGWFRYLDSHPF---SSEKCE---NFVPGWFLDIG--PMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLT-QDS-SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 3T1I Chain:A ((30-275)) | --------------------------------------------------------------------------------------------------ENTFKILVATDIHLGFMEKDAVRG-NDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSR----------KTLHT----CLELLRKYCMGDRPVQFEILSDQLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDER-----LYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGST----------NFIPEQF---LDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAIQSFCLEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55706 for 1473 contacts (-37.8/contact) +
2D Compatibility (PS) -21080 + (NN) -3624 + (LL) 8148
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -79012.0 ( -53.64 by residue)
QMean score : ?
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