Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSN----YLLVAAAETLE-KDLFNQYGLISGKIYVILPSSKVTCISQNVEH--SSKRLLI----------NNFDELFHLVNCSKEDH--------------TK---ELQRSKAIDECAITLLKSSELLPYALVVDVNFK-D-----EYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 1TKS Chain:A ((3-202)) | -----NIFTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLAGTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYISK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116508 for 1239 contacts (-94.0/contact) +
2D Compatibility (PS) -16552 + (NN) -7676 + (LL) 12872
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -133764.0 ( -107.96 by residue)
QMean score : 0.416
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