Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
4HRM Chain:B ((59-133))
---HLEIVEVLLKHGADVNAHDW---TPLHLAAKYGHLEIVEVLLKHGADVN---NAGKTPLHLAAAHGHLEIVEVLLKAD
General information:
TITO was launched using:
RESULT:
Template:
4HRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29949 for 468 contacts (-64.0/contact) +
2D Compatibility (PS) -7476 + (NN) -4610 + (LL) 568
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -49167.0 ( -105.06 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4HRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HRM-query.scw
PDB file :
Tito_Scwrl_4HRM.pdb
: