Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNL-IFQKKLGQCNNISRFSLIRKSIARILTVLNERRIEGKSA
1K9M Chain:W ((5-62))
---VQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD-----
General information:
TITO was launched using:
RESULT:
Template:
1K9M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17652 for 302 contacts (-58.5/contact) +
2D Compatibility (PS) -6060 + (NN) -3528 + (LL) 504
1D Compatibility (HY) 0 + (ID) 950
Total energy: -27686.0 ( -91.68 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_1K9M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K9M-query.scw
PDB file :
Tito_Scwrl_1K9M.pdb
: