Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MIHVAIYMLLLC-----MSAMLYRIAKLSDIYNKALA-FNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1JFA Chain:A ((1-354)) | MENFPTEYFLNTTVRLLEYIRYRDSNYTREERIENLHYAYNKAAHHFAQPRQQQLLKVD--PKRLQASLQTIVGMVVYSWAKVSKECMADLSIHYTYTLVLDDSKDDPYPTMVNYFDDLQAGREQAHPWWALVNEHFPNVLRHFGPFCSLNLIRSTLDFFEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNERSLFLEITSAIAQMENWMVWVNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVAVFSDKDPQVMDTIECFMHGYVTWHLCDRRYRLSEIYEKVKEEKTEDAQKFCKFYEQAANVGAVSPSEWAYPPVAQLANV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54307 for 438 contacts (-124.0/contact) +
2D Compatibility (PS) -8461 + (NN) -5111 + (LL) 336
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -69493.0 ( -158.66 by residue)
QMean score : 0.296
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