Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
1DNG Chain:A ((1-15))
--------------------------------------------------------------------------------QAPAYEEAAEELAKS
General information:
TITO was launched using:
RESULT:
Template:
1DNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2504 for 53 contacts (47.2/contact) +
2D Compatibility (PS) -1579 + (NN) 511 + (LL) 7464
1D Compatibility (HY) -800 + (ID) 100
Total energy: 8000.0 ( 150.94 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1DNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DNG-query.scw
PDB file :
Tito_Scwrl_1DNG.pdb
: