Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHDIEYIRQNSEEFEKAMESRGMKEFSAEEILKVDHKKRLLTTKLQDLNRQRNEITKKIKELKMSKSPCE------------------------KQIKSSKNITNE--IEAISLKEQMEKDKLVNILSNLPNIPVQGVPIGAGENSNLEVRR------YREKRQFDFVPKSHYELGERLGLMDFEQAAKISGSRFAILKGQLAKLGRALINFMLEMHVNEFGYTEVYHPVLVKNEAMYNVGQLPKFSDDSYL--TTDELRLIPTGEVVLTNSVADKIVEEKKLPIRFTAYSECFRKEAGSAGQSTRGMIRQHQFGKVE--LVSITTEDQSNDELERMTGVAEEILKRLELPYRVILLCSGDMGFAAQKTYDIEVWLPEQNRYREISSCSNCGNFQARRMNAKYSLEANKKVKK--YVHTLNGSALAIGRTIIAVMENYQNPDGSITIPNVLQKYISNGTVISK |
| 3VBB Chain:A ((34-463)) | ----------------------------DQLVKADSEWRRCRFRADNLNKLKNLCSKTIGEKMKKKE---DESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFEN-LREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-------SHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT-LGSRGYIPIYTPFFMRKEVMQEVAQLS-FDEELYKVI--DEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGS----TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYG-QT---MDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110012 for 2779 contacts (-39.6/contact) +
2D Compatibility (PS) -39668 + (NN) -16893 + (LL) 3500
1D Compatibility (HY) -27600 + (ID) 6500
Total energy: -197173.0 ( -70.95 by residue)
QMean score : 0.431
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