Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFGLHHFNYTLKKNKNDVAKALFEYGAKIDVDYVEERLIISGTTEYSQSTVEILLPYASI
1SNX Chain:A ((374-406))
--FGLVHLGYWL--NKDKVAIKTIREGAMSEEDFIEE------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -482 for 136 contacts (-3.5/contact) +
2D Compatibility (PS) -3290 + (NN) 2688 + (LL) 2552
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -1282.0 ( -9.43 by residue)
QMean score : -0.017
(partial model without unconserved sides chains):
PDB file :
Tito_1SNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SNX-query.scw
PDB file :
Tito_Scwrl_1SNX.pdb
: