Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVSKFKSPLPEGKKSEILKLVEQNKEVFISGKTLYKAFTDVGQSVDD
4RS9 Chain:B ((1-19))
------------------------------------------SVPQARKASLARFLEKRKE---------------------
General information:
TITO was launched using:
RESULT:
Template:
4RS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4738 for 68 contacts (69.7/contact) +
2D Compatibility (PS) -2122 + (NN) -1355 + (LL) 2476
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 2287.0 ( 33.63 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_4RS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RS9-query.scw
PDB file :
Tito_Scwrl_4RS9.pdb
: