Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVILKENIRTLGKLGEIVKVKPGYARNFLFPQRKAVKATKESIAKLEEQRSFLEEENIRKLNLASELAASFAGKFVILVKQASEDGKIFGSVTTREVARSLSQEYEVDHRKISFNGVKIRNLGEYQASIEFHSEIVVQVAVHVVRSETDAHELRQVKSQSQKSQQQEAKQNEVGEATDSDKADQK
3J5L Chain:H ((1-55))
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEA----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24545 for 344 contacts (-71.4/contact) +
2D Compatibility (PS) -6002 + (NN) -2462 + (LL) 10364
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -29795.0 ( -86.61 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_3J5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J5L-query.scw
PDB file :
Tito_Scwrl_3J5L.pdb
: