Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVIIDSRSINNLNWN--YREIANQN---GCDQIIVITNSSAADCFMH--IYNADGGEVEMCGNAARCVGYLIMSEKSTEYATIELVNKRILECFKVGGRSI---------KVNMGKPLFKWHEIPLSA-KCDPLHLPIELEMLKDPVAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLITRQTSVNLPGGKLLIEW--PDN-IFMTGDIGFL |
| 4IK0 Chain:B ((5-262)) | -------KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG--------LTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183301 for 1919 contacts (-95.5/contact) +
2D Compatibility (PS) -25924 + (NN) -5309 + (LL) 984
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -233000.0 ( -121.42 by residue)
QMean score : 0.413
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