Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDDCNFTSKEDVVINLNEMDIIFIRQDPPFD---MRYITTTYILEKTRALVINNPTEMRNCPEKLITSLFP-----------ELIPPTLITENISMIRDFYHDYR-GIILKPLYSYGGNDVIRIQNENSIQVVVELMITKYKCPVIAQAFCKNVNKDKRILLLDGQPIGVMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRG-LIFVGIDIVDD-----FLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 1PK8 Chain:A ((177-418)) | ---------------------------------------------------------------RSLKPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPNH---KEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVAL-TKTYATAEPFIDAK-YDVRVQKIGQNYKAYM-RTSV-SGNWKTNTGS-AMLEQIAMSDRYKLWVDTCSEIF---GGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMTQA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107336 for 1671 contacts (-64.2/contact) +
2D Compatibility (PS) -23645 + (NN) -1314 + (LL) 6180
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: -131465.0 ( -78.67 by residue)
QMean score : 0.330
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