Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDAVNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAK-KIVESAIKSRN
1I6T Chain:A ((15-174))
------------IYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKN
General information:
TITO was launched using:
RESULT:
Template:
1I6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84302 for 1242 contacts (-67.9/contact) +
2D Compatibility (PS) -17396 + (NN) -5405 + (LL) 988
1D Compatibility (HY) -14800 + (ID) 4500
Total energy: -125415.0 ( -100.98 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1I6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6T-query.scw
PDB file :
Tito_Scwrl_1I6T.pdb
: