Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNLGIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKLDVDWCITTPDFIAKI-TPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYFKSVFLNSTMGKAYKMSKVEDII
3TG8 Chain:A ((34-225))
------------------ATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDG-WMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIK-GRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS---
General information:
TITO was launched using:
RESULT:
Template:
3TG8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105360 for 1467 contacts (-71.8/contact) +
2D Compatibility (PS) -21045 + (NN) -14185 + (LL) 1604
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -158236.0 ( -107.86 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3TG8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TG8-query.scw
PDB file :
Tito_Scwrl_3TG8.pdb
: