Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKPLVEQ-----EKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDK-LSKLGSNLLMEVIDEIE--KHPPLEQSDDGACYA--DKIEDYKIYASDICEVAYRKVKAF--YPKAFVKIEHKRVRILDADFEVDASLTSGQGKIINDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
| 2CFI Chain:A ((28-280)) | IGQSLFGQEVYCHLRKEGHEVVGVFT-VPDKDGKA-----DPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109310 for 1808 contacts (-60.5/contact) +
2D Compatibility (PS) -26303 + (NN) -14475 + (LL) 660
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -164528.0 ( -91.00 by residue)
QMean score : 0.426
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