Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
2UXB Chain:T ((21-94))
---------------KRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEA
General information:
TITO was launched using:
RESULT:
Template:
2UXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7571 for 514 contacts (-14.7/contact) +
2D Compatibility (PS) -7646 + (NN) -1150 + (LL) 1636
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -16231.0 ( -31.58 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2UXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXB-query.scw
PDB file :
Tito_Scwrl_2UXB.pdb
: