Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
3G4C Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVS--------ERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELCGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G4C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161267 for 1477 contacts (-109.2/contact) +
2D Compatibility (PS) -20492 + (NN) -1217 + (LL) 6036
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -200890.0 ( -136.01 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3G4C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G4C-query.scw
PDB file :
Tito_Scwrl_3G4C.pdb
: