Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSLVLVYTTFSNVKEAKAVSEELLNKKLIICVNIFPKVNSLYLWKGEINSSCEVIAIMKSRSDQVDKIVEKVEAMHSYDQPAIVIIPIEKVNKSFANWVNSVIDVSSIGV
1O5J Chain:A ((2-100))
----ILVYSTFPNEEKALEIGRKLLEKRLIACFNAF-EIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENVLTEYMNWLRESVL------
General information:
TITO was launched using:
RESULT:
Template:
1O5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62928 for 627 contacts (-100.4/contact) +
2D Compatibility (PS) -10961 + (NN) -4724 + (LL) 604
1D Compatibility (HY) -10000 + (ID) 1800
Total energy: -89809.0 ( -143.24 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1O5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5J-query.scw
PDB file :
Tito_Scwrl_1O5J.pdb
: