Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
1WQF Chain:A ((2-183))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLE-
General information:
TITO was launched using:
RESULT:
Template:
1WQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90740 for 1281 contacts (-70.8/contact) +
2D Compatibility (PS) -20041 + (NN) -5425 + (LL) 128
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -128578.0 ( -100.37 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_1WQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WQF-query.scw
PDB file :
Tito_Scwrl_1WQF.pdb
: