Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIP-TLLG-YAGVGISFGIVASSQNFSI-LEIILLCLVIYAGAAQF-IMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLV---TDETFGVA-ITPYLKGEAINDRWMHGLNI------TAYLFWAISCVAGALFGEYIS-------NPQTLGLDFAITA-MFIFLAIAQFESITKSRLRIYIVL---IIAVIVMMLSLSMF---MPSYLAILIAATISAA----LGVMMER |
| 4RHO Chain:A ((4-259)) | DKIHHHHHHENLYFQGMEIKAMFRDVSLS------SRNFSEMLSRESKVVAALAAKSPLMAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASHAAIWNGNTRPNEGASMSCHVSDEKVLPDRFSTRLGVPDCYAKSQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWMLYLPKVITQ-QQVPEARALIPVSAKGKQTGTIIVSVTDAPFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255789 for 1657 contacts (-154.4/contact) +
2D Compatibility (PS) -22615 + (NN) 5301 + (LL) 604
1D Compatibility (HY) 5600 + (ID) 1600
Total energy: -268499.0 ( -162.04 by residue)
QMean score : 0.119
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