Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFA-IKNVEKNIVYDELKSLDI---TIIESQDSYKNKLKRLFSVLLQSKKI
3SW3 Chain:A ((200-264))
-----GIFVYFPDEQVLYGNDILKEKLGNL--SFADVKAYPQTL--ERLKAMKLPIKTVIGGHD-------------------
General information:
TITO was launched using:
RESULT:
Template:
3SW3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17973 for 272 contacts (-66.1/contact) +
2D Compatibility (PS) -5237 + (NN) 533 + (LL) 2236
1D Compatibility (HY) -7200 + (ID) 850
Total energy: -28491.0 ( -104.75 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_3SW3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SW3-query.scw
PDB file :
Tito_Scwrl_3SW3.pdb
: