Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------MLVCMCFKVLKTLKIGCTEKPHLLKL----------------- |
| 4OMV Chain:A ((3-205)) | AMLLYTKKDDIYSDIVRMILLIKGANAKIVDVSKEENSKHLEELNIITPNGNIPTLSTDDFAVYRLSVIIEAIEDLYPFPPMFPVFPKQRANARILLEYVNKTFLQNIIKLQSPDLDEKQANEIKMLMQRDIISTYKKIVSERAQNINVLTLIITFVFYYFIKLKISIPTKDKNIIKEIKELLSEPNFIKTIKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5606 for 98 contacts (-57.2/contact) +
2D Compatibility (PS) -2806 + (NN) -4432 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -16694.0 ( -170.35 by residue)
QMean score : 0.363
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