Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNLLVKSK
4C9E Chain:A ((70-128))
-------------------GVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIF-DVSENPEAIDQLNQGSEDPLKRPV-------
General information:
TITO was launched using:
RESULT:
Template:
4C9E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3312 for 358 contacts (9.3/contact) +
2D Compatibility (PS) -6180 + (NN) 1129 + (LL) 2096
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -1693.0 ( -4.73 by residue)
QMean score : 0.141
(partial model without unconserved sides chains):
PDB file :
Tito_4C9E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C9E-query.scw
PDB file :
Tito_Scwrl_4C9E.pdb
: