Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINRYITRGISEYLSLDLQILLWNMVKERDNQP-HTDYLHIFKLQEDENI-LSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY
1K93 Chain:A ((432-496))
------IFRGIQAYNEIE------NVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQK----FKLLYKQLNFTENE----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10702 for 299 contacts (-35.8/contact) +
2D Compatibility (PS) -6000 + (NN) -1683 + (LL) 4176
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -20309.0 ( -67.92 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1K93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K93-query.scw
PDB file :
Tito_Scwrl_1K93.pdb
: